Max Planck Institute of Biophysics

Publications of the Max Planck Institute of Biophysics

Publications of the Max Planck Institute of Biophysics

Journal Article (46)

2007

Journal Article

Becker, D.; Fendler, K.; Altendorf, K.; Greie, J.-C.: The Conserved Dipole in Transmembrane Helix 5 of KdpB in the Escherichia coli KdpFABC P-Type ATPase Is Crucial for Coupling and the Electrogenic K⁺-Translocation Step. Biochemistry 46 (48), pp. 13920 - 13928 (2007)

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Journal Article

Chillakuri, C. R.; Reinhart, C.; Michel, H.: C-terminal truncated cannabinoid receptor 1 co-expressed with G protein trimer in Sf9 cells exist in a precoupled state and show constitutive activity. The FEBS Journal 274 (23), pp. 6106 - 6115 (2007)

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Journal Article

Shastri, S.; Vonck, J.; Pfleger, N.; Haase, W.; Kühlbrandt, W.; Glaubitz, C.: Proteorhodopsin: Characterisation of 2D crystals by electron microscopy and solid state NMR. Biochimica et Biophysica Acta-Biomembranes 1768 (12), pp. 3012 - 3019 (2007)

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Journal Article

Tsai, C.-J.; Ejsing, C. S.; Shevchenko, A.; Ziegler, C.: The role of lipids and salts in two-dimensional crystallization of the glycine–betaine transporter BetP from Corynebacterium glutamicum. Journal of Structural Biology 160 (3), pp. 275 - 286 (2007)

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Journal Article

Zimmermann, D.; Westhoff, M.; Zimmermann, G.; Geßner, P.; Wegner, L.H.; Rokitta, M.; Ache, P.; Schneider, H.; Vásquez, J.A.; Kruck, W. et al.; Shirley, S.; Jakob, P.; Hedrich, R.; Bentrup, F.-W.; Bamberg, E.; Zimmermann, U.: Foliar water supply of tall trees: evidence for mucilage-facilitated moisture uptake from the atmosphere and the impact on pressure bomb measurements. Protoplasma 232 (1-2), 11, pp. 11 - 34 (2007)

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Journal Article

Schäfer, E.; Dencher, N. A.; Vonck, J.; Parcej, D.: Three-Dimensional Structure of the Respiratory Chain Supercomplex I₁III₂IV₁ from Bovine Heart Mitochondria. Biochemistry 46 (44), pp. 12579 - 12585 (2007)

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Journal Article

Sukhorukov, V. L.; Endter, J. M.; Zimmermann, D.; Shirakashi, R.; Fehrmann, S.; Kiesel, M.; Reuss, R.; Hedrich, R.; Bamberg, E.; Roitsch, T. G. et al.; Zimmermann, U.: Mechanisms of electrically mediated cytosolic Ca²⁺ transients in aequorin-transformed tobacco cells. Biophysical Journal 93 (9), pp. 3324 - 3337 (2007)

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Journal Article

Gakamsky, D. M.; Lewitzki, E.; Grell, E.; Saulquin, X.; Malissen, B.; Montero-Julian, F.; Bonneville, M.; Pecht, I.: Kinetic evidence for a ligand-binding-induced conformational transition in the T cell receptor. PNAS 104 (42), pp. 16639 - 16644 (2007)

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Journal Article

Srinivasan, V.; Netz, D. J. A.; Webert, H.; Mascarenhas, J.; Plerik, A. J.; Michel, H.; Lill, R.: Structure of the Yeast WD40 Domain Protein Cia1, a Component Acting Late in Iron-Sulfur Protein Biogenesis. Structure 15 (10), pp. 1246 - 1257 (2007)

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Journal Article

Wedemeyer, U.; Peng, G.; Michel, H.; Hartung, K.: Protein AQ_1862 from the Hyperthermophilic Bacterium Aquifex aeolicus is a Porin and Contains Two Conductance Pathways of Different Selectivity. Biophysical Journal 93 (8), pp. 2667 - 2677 (2007)

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Journal Article

Gompf, S.; Zutz, A.; Hofacker, M.; Haase, W.; van der Does, C.; Tampé, R.: Switching of the homooligomeric ATP-binding cassette transport complex MDL1 from post-translational mitochondrial import to endoplasmic reticulum insertion. The FEBS Journal 274 (20), pp. 5298 - 5310 (2007)

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Journal Article

Kirchhoff, H.; Haase, W.; Wegner, S.; Danielsson, R.; Ackermann, R.; Albertsson, P.-A.: Low-Light-Induced Formation of Semicrystalline Photosystem II Arrays in Higher Plant Chloroplasts. Biochemistry 46 (39), pp. 11169 - 11176 (2007)

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Journal Article

Garcia-Celma, J. J.; Hatahet, L.; Kunz, W.; Fendler, K.: Specific Anion and Cation Binding to Lipid Membranes Investigated on a Solid Supported Membrane. Langmuir 23 (20), pp. 10074 - 10080 (2007)

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Journal Article

Barleben, L.; Panjikar, S.; Ruppert, M.; Koepke, J.; Stöckigt, J.: Molecular Architecture of Strictosidine Glucosidase: The Gateway to the Biosynthesis of the Monoterpenoid Indole Alkaloid Family. The Plant Cell 19 (9), pp. 2886 - 2897 (2007)

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Journal Article

Haase, A.; Wood, P. G.; Pintschovius, V.; Bamberg, E.; Hartung, K.: Time resolved kinetics of the guinea pig Na-Ca exchanger (NCX1) expressed in Xenopus oocytes: voltage and Ca²⁺ dependence of the pre-steady-state current investigated by photolytic Ca²⁺ concentration jumps. Pflügers Archiv: European Journal of Physiology 454 (6), pp. 1031 - 1042 (2007)

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Journal Article

Kirchhoff, H.; Haase, W.; Haferkamp, S.; Schott, T.; Borinski, M.; Kubitscheck, U.; Rögner, M.: Structural and functional self-organization of Photosystem II in grana thylakoids. Biochimica et Biophysica Acta, Bioenergetics 1767 (9), pp. 1180 - 1188 (2007)

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Journal Article

Meier, T.; Morgner, N.; Matthies, D.; Pogoryelov, D.; Keis, S.; Cook, G. M.; Dimroth, P.; Brutschy, B.: A tridecameric c ring of the adenosine triphosphate (ATP) synthase from the thermoalkaliphilic Bacillus sp. strain TA2.A1 facilitates ATP synthesis at low electrochemical proton potential. Molecular Microbiology 65 (5), pp. 1181 - 1192 (2007)

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Journal Article

Oldenburg, J.; Bevans, C. G.; Fregin, A.; Geisen, C.; Müller-Reible, C.; Watzka, M.: Current pharmacogenetic developments in oral anticoagulation therapy: The influence of variant VKORC1 and CYP2C9 alleles. Thrombosis and Haemostasis 98 (3), pp. 570 - 578 (2007)

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Journal Article

Shukla, A. K.; Haase, W.; Reinhart, C.; Michel, H.: Heterologous expression and characterization of the recombinant bradykinin B₂ receptor using the methylotrophic yeast Pichia pastoris. Protein Expression and Purification 55 (1), pp. 1 - 8 (2007)

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Journal Article

Trentmann, O.; Horn, M.; Terwisscha van Scheltinga, A.; Neuhaus, H. E.; Haferkamp, I.: Enlightening Energy Parasitism by Analysis of an ATP/ADP Transporter from Chlamydiae. PLoS Biology 5 (9), e231, pp. 1938 - 1951 (2007)

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Journal Article

Kalmbach, R.; Chizhov, I.; Schuhmacher, M. C.; Friedrich, T.; Bamberg, E.; Engelhard, M.: Functional Cell-free Synthesis of a Seven Helix Membrane Protein: In situ Insertion of Bacteriorhodopsin into Liposomes. Journal of Molecular Biology 371 (3), pp. 639 - 648 (2007)

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Journal Article

Pogoryelov, D.; Reichen, C.; Klyszejko, A. L.; Brunisholz, R.; Muller, D. J.; Dimroth, P.; Meier, T.: The oligomeric state of c rings from cyanobacterial F-ATP synthases varies from 13 to 15. Journal of Bacteriology 189 (16), pp. 5895 - 5902 (2007)

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Journal Article

Koepke, J.; Krammer, E.-M.; Klingen, A. R.; Sebban, P.; Ullmann, G. M.; Fritzsch, G.: pH Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter sphaeroides in the Neutral and Charge Separated States. Journal of Membrane Biology 371 (2), pp. 396 - 409 (2007)

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Journal Article

Kedrov, A.; Wegmann, S.; Smits, S. H.J.; Goswami, P.; Goswami, P.; Baumann, H.; Muller, D. J.: Detecting molecular interactions that stabilize, activate and guide ligand-binding of the sodium/proton antiporter MjNhaP1 from Methanococcus jannaschii. Journal of Structural Biology 159 (2), pp. 290 - 301 (2007)

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Journal Article

Screpanti, E.; Hunte, C.: Discontinuous membrane helices in transport proteins and their correlation with function. Journal of Structural Biology 159 (2), pp. 261 - 267 (2007)

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Journal Article

Stocker, A.; Keis, S.; Vonck, J.; Cook, G. M.; Dimroth, P.: The Structural Basis for Unidirectional Rotation of Thermoalkaliphilic F₁-ATPase. Structure 15 (8), pp. 904 - 914 (2007)

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Journal Article

Klammt, C.; Srivastava, A.; Eifler, N.; Junge, F.; Beyermann, M.; Schwarz, D.; Michel, H.; Doetsch, V.; Bernhard, F.: Functional analysis of cell-free produced human endothelin B receptor reveals transmembrane segment 1 as an essential area for ET-1 binding and homodimer formation. The FEBS Journal 274 (13), pp. 3257 - 3269 (2007)

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Journal Article

Klammt, C.; Schwarz, D.; Eifler, N.; Engel, A.; Piehler, J.; Haase, W.; Hahn, S.; Dötsch, V.; Bernhard, F.: Cell-free production of G protein-coupled receptors for functional and structural studies. Journal of Structural Biology 158 (3), pp. 482 - 493 (2007)

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Journal Article

Olkhova, E.; Padan, E.; Michel, H.: The Influence of Protonation States on the Dynamics of the NhaA Antiporter from Escherichia coli. Biophysical Journal 92 (11), pp. 3784 - 3791 (2007)

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Journal Article

Plewnia, G.; Schulze, K.; Hunte, C.; Tampé, R.; Koch, J.: Modulation of the Antigenic Peptide Transporter TAP by Recombinant Antibodies Binding to the Last Five Residues of TAP1. Journal of Molecular Biology 369 (1), pp. 95 - 107 (2007)

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Journal Article

Shukla, A. K.; Haase, W.; Reinhart, C.; Michel, H.: Heterologous expression and comparative characterization of the human neuromedin U subtype II receptor using the methylotrophic yeast Pichia pastoris and mammalian cells. The International Journal of Biochemistry & Cell Biology 39 (5), pp. 931 - 942 (2007)

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Journal Article

Lancaster, C. R. D.; Hunte, C.; Kelley III, J.; Trumpower, B. L.; Ditchfield, R.: A Comparison of Stigmatellin Conformations, Free and Bound to the Photosynthetic Reaction Center and the Cytochrome bc₁ Complex. Journal of Molecular Biology (London) 368 (1), pp. 197 - 208 (2007)

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Journal Article

Amarie, S.; Standfuß, J.; Barros, T.; Kühlbrandt, W.; Dreuw, A.; Wachtveitl, J.: Carotenoid Radical Cations as a Probe for the Molecular Mechanism of Nonphotochemical Quenching in Oxygenic Photosynthesis. The Journal of Physical Chemistry B B 111 (13), pp. 3481 - 3487 (2007)

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Journal Article

Zhang, F.; Wang, L.-P.; Brauner, M.; Liewald, J. F.; Kay, K.; Watzke, N.; Wood, P. G.; Bamberg, E.; Nagel, G.; Gottschalk, A. et al.; Deisseroth, K.: Multimodal fast optical interrogation of neural circuitry. Nature 446 (7136), pp. 633 - 639 (2007)

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Journal Article

Cheap, H.; Tandori, J.; Derrien, V.; Benoit, M.; de Oliveira, P.; Koepke, J.; Lavergne, J.; Maroti, P.; Sebban, P.: Evidence for Delocalized Anticooperative Flash Induced Proton Binding as Revealed by Mutants at the M266His Iron Ligand in Bacterial Reaction Centers. Biochemistry 46 (15), pp. 4510 - 4521 (2007)

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Journal Article

Schemberg, J.; Schneider, K.; Demmer, U.; Warkentin, E.; Müller, A.; Ermler, U.: Towards Biological Supramolecular Chemistry: A Variety of Pocket-Templated Metal Oxide Cluster Nucleations in the Cavity of a Mo/W-Storage Protein. Angewandte Chemie, International Edition in English 46 (14), pp. 2408 - 2413 (2007)

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Journal Article

Klingen, A. R.; Palsdottir, H.; Hunte, C.; Ullmann, G. M.: Redox-linked protonation state changes in cytochrome bc₁ identified by Poisson-Boltzmann electrostatics calculations. Biochimica et Biophysica Acta, Bioenergetics 1767 (3), pp. 204 - 221 (2007)

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Journal Article

Seedorf, H.; Hagemeier, C. H.; Shima, S.; Thauer, R. K.; Warkentin, E.; Ermler, U.: Structure of coenzyme F₄₂₀H₂ oxidase (FprA), a di-iron flavoprotein from methanogenic Archaea catalysing the reduction of O₂ to H₂O. The FEBS Journal 274 (6), pp. 1588 - 1599 (2007)

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Journal Article

Hofacker, M.; Gompf, S.; Zutz, A.; Presenti, C.; Haase, W.; van der Does, C.; Model, K.; Tampé, R.: Structural and Functional Fingerprint of the Mitochondrial ATP-binding Cassette Transporter Mdl1 from Saccharomyces cerevisiae. The Journal of Biological Chemistry 282 (6), pp. 3951 - 3961 (2007)

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Journal Article

Wenz, T.; Covian, R.; Hellwig, P.; MacMillan, F.; Meunier, B.; Trumpower, B. L.; Hunte, C.: Mutational Analysis of Cytochrome b at the Ubiquinol Oxidation Site of Yeast Complex III. The Journal of Biological Chemistry 282 (6), pp. 3977 - 3988 (2007)

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Journal Article

Marquez-Klaka, B.; Rettinger, J.; Bhargava, Y.; Eisele, T.; Nicke, A.: Identification of an Intersubunit Cross-Link between Substituted Cysteine Residues Located in the Putative ATP Binding Site of the P2X₁ Receptor. The Journal of Neuroscience 27 (6), pp. 1456 - 1466 (2007)

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Journal Article

Majorovits, E.; Barton, B.; Schultheiß, K.; Pérez-Willard, F.; Gerthsen, D.; Schröder, R. R.: Optimizing phase contrast in transmission electron microscopy with an electrostatic (Boersch) phase plate. Ultramicroscopy 107 (1-2), pp. 213 - 226 (2007)

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Journal Article

Schmidt-Krey, I.; Haase, W.; Mutucumarana, V.; Stafford, D. W.; Kühlbrandt, W.: Two-dimensional crystallization of human vitamin K-dependent γ-glutamyl carboxylase. Journal of Structural Biology 157 (2), pp. 437 - 442 (2007)

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Journal Article

de Olivereira, P.; Ranjbari, A.; Baciou, L.; Bizouarn, T.; Ollesch, G.; Ermler, U.; Sebban, P.; Keita, B.; Nadjo, L.: Preliminary electrochemical studies of the flavohaemoprotein from Ralstonia eutropha entrapped in a film of methyl cellulose: activation of the reduction of dioxygen. Bioelectrochemistry 70 (1), pp. 185 - 191 (2007)

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Journal Article

Schröder-Lang, S.; Schwärzel, M.; Seifert, R.; Strünker, T.; Kateriya, S.; Looser, J.; Watanabe, M.; Kaupp, B.; Hegemann, P.; Nagel, G.: Fast manipulation of cellular cAMP level by light in vivo. Nature Methods 4 (1), pp. 39 - 42 (2007)

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Journal Article

Yildiz, Ö.; Kalthoff, C.; Raunser, S.; Kühlbrandt, W.: Structure of GlnK1 with bound effectors indicates regulatory mechanism for ammonia uptake. The EMBO Journal 26 (2), pp. 589 - 599 (2007)

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Book Chapter (7)

2007

Book Chapter

Lancaster, C. R. D.: Structures of Reaction Centers in Anoxygenic Bacteria. In: Primary Processes of Photosynthesis. Principles and Apparatus. Part 2: Reaction Centers / Photosystems, Electron Transport Chains, Photophosphorylation and Evolution, Vol. 2, pp. 5 - 56 (Ed. Renger, G.). Royal Society of Chemistry, Cambridge (2007)

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Book Chapter

Beissner, F.; Henke, C.; Schwarz, W.; Schikora, D.; Lanfermann, H.: Placebo-Controlled Studies of Laser Acupuncture Effects on the Human Brain as Measured by Functional Magnetic Resonance Imaging (fMRI). In: Scientific Approaches to Chinese Medicine, pp. 1 - 5 (Ed. Medicine, C.-G. R. F. f. T. C.). Heidelberg School Edition, Heidelberg (2007)

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Book Chapter

Deng, H.; Yang, Z.; Du, H.; Gu, Q.; Shen, X.; Schwarz, W.: Possible role of the Na⁺/K⁺-ATPase in analgesia by acupuncture. In: Scientific Approaches to Chinese Medicine, pp. 7 - 8 (Ed. Medicine, C.-G. R. F. f. T. C.). Heidelberg School Edition, Heidelberg (2007)

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Book Chapter

Gu, Q.; Du, H.; Xuan, L.; Schwarz, W.: GAT1 and EAAC1 in Xenopus oocytes as target for screening extracts of Chinese herbs. In: Scientific Approaches to Chinese Medicine, pp. 29 - 31 (Ed. Medicine, C.-G. R. F. f. T. C.). Heidelberg School Edition, Heidelberg (2007)

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Book Chapter

Zhang, D.; Ding, G.; Schwarz, W.: Cellular Mechanisms in Acupuncture Effects. In: Scientific Approaches to Chinese Medicine, p. 91 - 91 (Ed. Medicine, C.-G. R. F. f. T. C.). Heidelberg School Edition, Heidelberg (2007)

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Book Chapter

Zhang, D.; Spielmann, A.; Ding, G.; Schwarz, W.: Role of Mast Cells as Peripheral Target in Acupunture and Moxibustion. In: Scientific Approaches to Chinese Medicine, pp. 87 - 90 (Ed. Medicine, C.-G. R. F. f. T. C.). Heidelberg School Edition, Heidelberg (2007)

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Book Chapter

Oda, T.; Stegmann, H.; Schröder, R. R.; Namba, K.; Maéda, Y.: Modeling of the F-Actin Structure. In: Regulatory Mechanisms of Striated Muscle Contraction, 32, pp. 385 - 401 (Eds. Ebashi, S.; Ohtsuki, I.). Springer Japan, Japan (2007)

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Conference Paper (1)

2007

Conference Paper

Terpitz, U.; Raimunda, D.; Zhou, A.; Feldbauer, K.; Sukhorukov, V.; Beauge, L.; Bamberg, E.; Zimmermann, D.: Giant cells obtained by electrofusion: a novel heterologeous expression system. 6th EBSA European Biophysics Congress, Imperial College London, July 14, 2007 - July 18, 2007. European Biophysics Journal 36 (Supplement 1), p. S152 - S152 (2007)

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Thesis - PhD (17)

2007

Thesis - PhD

Wedemeyer, U.: Functional and Structural Membrane Proteomics using Aquifex aeolicus. Dissertation, Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - PhD

Lotz, M.: Studies on the protein translocation in Escherichia coli: anaysis of the integral membrane proteins SecYEG and YidC employing biochemical and crystallographic methods. Dissertation, Johann Wolfgang Goethe-Universität, Frankfurt am Main (2007)

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Thesis - PhD

Herzog, E.: Theoretical Investigation of Transmembrane Electron Coupled Proton Transfer in Quinol: Fumarate Reductase from Wolinella succinogenes. Dissertation, Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - PhD

Cenacchi, L.: Heterologous Production and Characterization of Two Distinct Di-Heme Containing Membrane Integral Cytochrome b₅₆₁ Enzymes from Arabidopsis thaliana. Dissertation, Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - PhD

Griesbach, J.: The human GPCR Nicotinic Acid Receptor 1: Heterologous Overproduction in Pichia pastoris and the Reconstitution of its complex with β-Arrestin 1 in vivo and in vitro. Dissertation, Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - PhD

Surade, S.: Structural Genomics on Prokaryotic Membrane Proteins. Dissertation, Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - PhD

Chillakuri, C. R.: Purification and Characterization of Heterologously Produced Cannabinoid Receptor 1 and G proteins. Dissertation, Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - PhD

Mir, S. H.: Generation of recombinant antibodies against membrane proteins by phage display. Dissertation, Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - PhD

Roy, A.: Development of a novel approach and a new expression system for the production and crystallization of human G protein-coupled receptors. Dissertation, Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - PhD

Rajendran, C.: Structural studies on terminal oxidases and an electron donor to a terminal oxidase. Dissertation, Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - PhD

Tiwari, S.: Establishment of an Escherichia coli cell-free expression system for the large scale production of selected membrane proteins. Dissertation, Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - PhD

Juhnke, H.: Molekularbiologische und biochemische Charakterisierung der "Succinat-Dehydrogenase" aus Wolinella succinogenes. Dissertation, Johann Wolfgang Goethe-Universität, Frankfurt am Main (2007)

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Thesis - PhD

Chintalapati, S. C.: Expression and Characterization of P-type ATPases for Structural Studies. Dissertation, Johann Wolfgang Goethe-Universität, Frankfurt am Main (2007)

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Thesis - PhD

Kirchberg, K.: Untersuchung der Protonenbewegung während des O➝E Schrittes im katalytischen Zyklus der Cytochrom-c-Oxidase von Paracoccus denitrificans. Dissertation, Johann Wolfgang Goethe-Universität, Frankfurt am Main (2007)

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Thesis - PhD

Athanasiadu, D.: Investigations on subunit-specific assembly and structure-function studies of the voltage sensor in KCNQ potassium channel. Dissertation, Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - PhD

Krause, R.: Festkörperunterstützte Membranen zur Untersuchung von elektrogenen Transportvorgängen und deren Potential für die Hochdurchsatz-Wirkstoffsuche. Dissertation, Johann Wolfgang Goethe-Universität, Frankfurt am Main (2007)

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Thesis - PhD

Srivastava, A.: Production, Biochemical Characterization and Preliminary Structural Studies of Human Endothelin B Receptor in its Ligand-bound State. Dissertation, 138 pp., Johann Wolfgang Goethe-University, Frankfurt am Main (2007)

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Thesis - Diploma (2)

2007

Thesis - Diploma

Schäfer, H.: Herstellung eines löslichen GPCR-Signalkomplexes. Diploma, 83 pp., Universität Kassel, Kassel (2007)

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Thesis - Diploma

Schleidt, P.: Charakterisierung von durch gezielten Aminosäureaustausch generierten Varianten der Chinol:Fumarat-Reduktase aus Wolinella succinogenes. Diploma, 70 pp., Johann Wolfgang Goethe-Universität, Frankfurt am Main (2007)

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Thesis - Master (1)

2007

Thesis - Master

Hörer, E.: Expression, Characterization and Purification of a K-Opioid Receptor-GFP Fusion Protein. Master, 76 pp., Hochschule Mannheim, Fakultät für Biotechnologie, Institut für Molekular- und Zellbiologie, Mannheim (2007)

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