Max Planck Institute of Biophysics

Publications of the Max Planck Institute of Biophysics 1947 – present

Journal Article (78)

2017

Journal Article

D'Imprima, E.; Salzer, R.; Bhaskara, R. M.; Sánchez, R.; Rose, I.; Kirchner, L.; Hummer, G.; Kühlbrandt, W.; Vonck, J.; Averhoff, B.: Cryo-EM structure of the bifunctional secretin complex of Thermus thermophilus. eLife 6, 10.7554/eLife.30483 (2017)

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Journal Article

Stelzl, L. S.; Kells, A.; Rosta, E.; Hummer, G.: Dynamic Histogram Analysis To Determine Free Energies and Rates from Biased Simulations. Journal of Chemical Theory and Computation 13 (12), pp. 6328 - 6342 (2017)

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Journal Article

Klusch, N.; Murphy, B. J.; Mills, D.; Yildiy, Ö.; Kühlbrandt, W.: Structural basis of proton translocation and force generation in mitochondrial ATP synthase. eLife 6, e33274 (2017)

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Journal Article

Alvarez-Castelao, B.; Schanzenbächer, C. T.; Hanus, C.; Glock, C.; tom Dieck, S.; Dörrbaum, A. R.; Bartnik, I.; Nassim-Assir, B.; Ciirdaeva, E.; Mueller , A. et al.; Dietrich, D. C.; Tirrell, D. A.; Langer, J. D.; Schuman, E. M.: Cell-type-specific metabolic labeling of nascent proteomes in vivo. Nature Biotechnology 35 (12), pp. 1196 - 1201 (2017)

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Journal Article

Bazzone, A.; Zabadne, A. J.; Salisowski, A.; Madej, G. M.; Fendler, K.: Loose Relationship: Incomplete H⁺/Sugar Coupling in the MFS Sugar Transporter GlcP. Biophysical Journal 113 (12), pp. 2736 - 2749 (2017)

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Journal Article

Quirnheim Pais, D.; Rathmann, B.; Koepke, J.; Tomova, C.; Wurzinger, P.; Thielmann, Y.: A standardized technique for high-pressure cooling of protein crystals. Acta Crystallographica. Section D: Biological Crystallography (Copenhagen) 73 (12), pp. 997 - 1006 (2017)

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Journal Article

Jiang, S.; Wang, L.; Huang, M.; Jia, Z.; Weinert, T.; Warkentin, E.; Liu, C.; Song, X.; Zhang, H.; Witt, J. et al.; Qiu, L.; Peng, G.; Song, L.: DM9 Domain Containing Protein Functions As a Pattern Recognition Receptor with Broad Microbial Recognition Spectrum. Frontiers in immunology 8, 1607 (2017)

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Journal Article

Lazaridis, T.; Hummer, G.: Classical Molecular Dynamics with Mobile Protons. Journal of Chemical Information and Modeling 57 (11), pp. 2833 - 2845 (2017)

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Journal Article

Volkov, O.; Kovalev, K.; Polovinkin, V.; Borshchevskiy, V.; Bamann, C.; Astashkin, R.; Marin, E.; Popov, A.; Balandin, T.; Willbold, D. et al.; Büldt, G.; Bamberg, E.; Gordeliy, V.: Structural insights into ion conduction by channelrhodopsin 2. Science 358 (6366), eaan8862, p. 1018 (2017)

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Journal Article

Demmer, J. K.; Chowdhury, N. P.; Selmer, T.; Ermler, U.; Buckel, W.: The semiquinone swing in the bifurcating electron transferring flavoprotein/butyryl-CoA dehydrogenase complex from Clostridium difficile. Nature Communications 8, 1577 (2017)

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Journal Article

Chaffiol, A.; Caplette, R.; Jaillard, C.; Brazhnikova, E.; Desrosiers, M.; Dubus, E.; Duhamel, L.; Macé, E.; Marre, O.; Benoit, P. et al.; Hantraye, P.; Bemelmans, A.-P.; Bamberg, E.; Duebel, J.; Sahel, J.-A.; Picaud, S.; Dalkara, D.: A New Promoter Allows Optogenetic Vision Restoration with Enhanced Sensitivity in Macaque Retina. Molecular Therapy 25 (11), pp. 2546 - 2560 (2017)

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Journal Article

Cyrklaff, M.; Frischknecht, F.; Kudryashev, M.: Functional insights into pathogen biology from 3D electron microscopy. FEMS Microbiology Reviews 41 (6), pp. 828 - 853 (2017)

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Journal Article

Wang, J.; Brackmann, M.; Castaño-Díez, D.; Kudryashev, M.; Goldie, K. N.; Maier, T.; Stahlberg, H.; Basler, M.: Cryo-EM structure of the extended type VI secretion system sheath–tube complex. Nature Microbiology 2, pp. 1507 - 1512 (2017)

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Journal Article

Warkentin, E.; Weidenweber, S.; Schühle, K.; Demmer, U.; Heider, J.; Ermler, U.: A rare polyglycine type II-like helix motif in naturally occurring proteins. Proteins: Structure, Function, and Bioinformatics 85 (11), pp. 2017 - 2023 (2017)

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Journal Article

Eisinger, M. L.; Dörrbaum, A. R.; Michel, H.; Padan, E.; Langer, J. D.: Ligand-induced conformational dynamics of the Escherichia coli Na⁺/H⁺ antiporter NhaA revealed by hydrogen/deuterium exchange mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America 114 (44), pp. 11691 - 11696 (2017)

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Journal Article

Klapper, S. D.; Sauter, E. J.; Swiersy, A.; Hyman, M. A.E.; Bamann, C.; Bamberg, E.; Busskamp, V.: On-demand optogenetic activation of human stem-cell-derived neurons. Scientific Reports 7, 14450 (2017)

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Journal Article

Bahrami, A. H.; Lin, M. G.; Ren, X.; Hurley, J. H.; Hummer, G.: Scaffolding the cup-shaped double membrane in autophagy. PLoS Computational Biology 13 (10), e1005817 (2017)

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Journal Article

Jung, H.; Okazaki, K.-i.; Hummer, G.: Transition path sampling of rare events by shooting from the top. The Journal of Chemical Physics 147 (15), 152716 (2017)

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Journal Article

Leahy, C. T.; Kells, A.; Hummer, G.; Buchete, N.-V.; Rosta, E.: Peptide dimerization-dissociation rates from replica exchange molecular dynamics. The Journal of Chemical Physics 147 (15), 152725 (2017)

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Journal Article

Devos, S.; Van Putte, W.; Vitse, J.; Van Driessche, G.; Stremersch, S.; Van den Broek, W.; Raemdonck, K.; Braeckmans, K.; Stahlberg, H.; Kudryashev, M. et al.; Savvides, S. N.; Devreese, B.: Membrane vesicle secretion and prophage induction in multidrug-resistant Stenotrophomonas maltophilia in response to ciprofloxacin stress. Environmental Microbiology 19 (10), pp. 3930 - 3937 (2017)

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Journal Article

Martini, L.; Covino, R.; Hummer, G.; Buchete, N.-V.; Rosta, E.: Variational Identification of Markovian Transition States. Physical Review X 7 (3), 031060 (2017)

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Journal Article

Bahrami, A. H.; Hummer, G.: Formation and Stability of Lipid Membrane Nanotubes. ACS Nano 11 (9), pp. 9558 - 9565 (2017)

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Journal Article

Shevchenko, V.; Mager, T.; Kovalev, K.; Polovinkin, V.; Alekseev, A.; Juettner, J.; Chizhov, I.; Bamann, C.; Vavourakis, C.; Ghai, R. et al.; Gushchin, I.; Borshchevskiy, V.; Rogachev, A.; Melnikov, I.; Popov, A.; Balandin, T.; Rodriguez-Valera, F.; Manstein, D. J.; Bueldt, G.; Bamberg, E.; Gordeliy, V.: Inward H⁺ pump xenorhodopsin: Mechanism and alternative optogenetic approach. Science Advances 3 (9), e1603187 (2017)

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Journal Article

Sommer, M.; Xie, H.; Michel, H.: Pseudomonas stutzeri as an alternative host for membrane proteins. Microbial Cell Factories 16, 157 (2017)

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Journal Article

Henrich, E.; Sörmann, J.; Eberhardt, P.; Peetz, O.; Mezhyrova, J.; Morgner, N.; Fendler, K.; Dötsch, V.; Wachtveitl, J.; Bernhard, F. et al.; Bamann, C.: From Gene to Function: Cell-Free Electrophysiological and Optical Analysis of Ion Pumps in Nanodiscs. Biophysical Journal 113 (6), pp. 1331 - 1341 (2017)

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Journal Article

Sharma, V.; Belevich, G.; Gamiz-Hernandez, A. P.; Róg, T.; Vattulainen, I.; Verkhovskaya, M. L.; Wikström, M.; Hummer, G.; Kaila, V. R.I.: Redox-induced activation of the proton pump in the respiratory complex I. Proceedings of the National Academy of Sciences of the United States of America 112 (37), pp. 11571 - 11576 (2017)

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Journal Article

Weinert, T.; Olieric, N.; Cheng, R.; Brünle, S.; James, D.; Ozerov, D.; Gashi, D.; Vera, L.; Marsh, M.; Jaeger, K. et al.; Dworkowski, F.; Panepucci, E.; Basu, S.; Skopintsev, P.; Dorè, A. S.; Geng, T.; Cooke, R. M.; Liang, M.; Prota, A. E.; Paneels, V.; Nogly, P.; Ermler, U.; Schertler, G.; Hennig, M.; Steinmetz, M. O.; Wang, M.; Standfuss, J.: Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons. Nature Communications 8, 542 (2017)

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Journal Article

Stelzl, L. S.; Erlenbach, N.; Heinz, M.; Prisner, T. F.; Hummer, G.: Resolving the Conformational Dynamics of DNA with Ångstrom Resolution by Pulsed Electron–Electron Double Resonance and Molecular Dynamics. Journal of the American Chemical Society 139 (34), pp. 11674 - 11677 (2017)

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Journal Article

Bai, L.; Wagner, T.; Xu, T.; Hu, X.; Ermler, U.; Shima, S.: A Water-Bridged H-Bonding Network Contributes to the Catalysis of the SAM-Dependent C-Methyltransferase HcgC. Angewandte Chemie, International Edition in English 56 (36), pp. 10806 - 10809 (2017)

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Journal Article

Wagner, T.; Koch, J.; Ermler, U.; Shima, S.: Methanogenic heterodisulfide reductase (HdrABC-MvhAGD) uses two noncubane [4Fe-4S] clusters for reduction. Science 357 (6352), pp. 699 - 703 (2017)

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Journal Article

Halbleib, K.; Pesek, K.; Covino, R.; Hofbauer, H. F.; Wunnicke, D.; Hänelt, I.; Hummer, G.; Ernst, R.: Activation of the Unfolded Protein Response by Lipid Bilayer Stress. Molecular Cell 67 (4), pp. 673 - 684 (2017)

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Journal Article

Bausewein, T.; Mills, D. J.; Langer, J. D.; Nitschke, B.; Nussberger, S.; Kühlbrandt, W.: Cryo-EM Structure of the TOM Core Complex from Neurospora crassa. Cell 170 (4), pp. 693 - 700 (2017)

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Journal Article

Stelzl, L. S.; Hummer, G.: Kinetics from Replica Exchange Molecular Dynamics Simulations. Journal of Chemical Theory and Computation 13 (8), pp. 3927 - 3935 (2017)

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Journal Article

Patiño-Ruiz, M.; Ganea, C.; Fendler, K.; Călinescu, O.: Competition is the basis of the transport mechanism of the NhaB Na⁺/H⁺ exchanger from Klebsiella pneumoniae. PLoS One 12 (7), e0182293 (2017)

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Journal Article

Hau, A.-C.; Grebbin, B. M.; Agoston, Z.; Anders-Maurer, M.; Müller, T.; Groß, A.; Kolb, J.; Langer, J. D.; Döring, C.; Schulte, D.: MEIS homeodomain proteins facilitate PARP1/ARTD1-mediated eviction of histone H1. The Journal of Cell Biology: JCB 216 (9), pp. 2715 - 2729 (2017)

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Journal Article

Brandt, T.; Mourier, A.; Tain, L. S.; Partridge, L.; Larsson, N.-G.; Kühlbrandt, W.: Changes of mitochondrial ultrastructure and function during ageing in mice and Drosophila. eLife 6, e24662 (2017)

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Journal Article

Chiavazzo, E.; Covino, R.; Coifman, R. R.; Gear, C. W.; Georgiou, A. S.; Hummer, G.; Kevrekidis, I. G.: Intrinsic map dynamics exploration for uncharted effective free-energy landscapes. Proceedings of the National Academy of Sciences of the United States of America 114 (28), pp. E5494 - E5503 (2017)

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Journal Article

Daum, B.; Vonck, J.; Bellack, A.; Chaudhury, P.; Reichelt, R.; Albers, S.-V.; Rachel, R.; Kühlbrandt, W.: Structure and in situ organisation of the Pyrococcus furiosus archaellum machinery. eLife 6, e27470 (2017)

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Journal Article

Bai, L.; Fujishiro, T.; Huang, G.; Koch , J.; Takabayashi, A.; Yokono , M.; Tanaka , A.; Xu, T.; Hu , X.; Ermler, U. et al.; Shima , S.: Towards artificial methanogenesis: biosynthesis of the [Fe]-hydrogenase cofactor and characterization of the semi-synthetic hydrogenase. Faraday Discussions 198 (37), pp. 37 - 58 (2017)

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Journal Article

Călinescu, O.; Dwivedi, M.; Patiño-Ruiz, M.; Padan, E.; Fendler, K.: Lysine 300 is essential for stability but not for electrogenic transport of the Escherichia coli NhaA Na⁺/H⁺ antiporter. The Journal of Biological Chemistry 292 (19), pp. 7932 - 7941 (2017)

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Journal Article

Urmann, D.; Lorenz, C.; Linker, S. M.; Braun, M.; Wachtveitl, J.; Bamann, C.: Photochemical Properties of the Red-shifted Channelrhodopsin Chrimson. Photochemistry and Photobiology 93 (3), pp. 782 - 795 (2017)

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Journal Article

Malinverni, D.; Jost-Lopez, A.; De Los Rios, P.; Hummer, G.; Barducci, A.: Modeling Hsp70/Hsp40 interaction by multi-scale molecular simulations and coevolutionary sequence analysis. eLife 6, e23471 (2017)

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Journal Article

Ghysels, A.; Venables, R. M.; Pastor, R. W.; Hummer, G.: Position-Dependent Diffusion Tensors in Anisotropic Media from Simulation: Oxygen Transport in and through Membranes. Journal of Chemical Theory and Computation 13 (6), pp. 2962 - 2976 (2017)

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Journal Article

Reichel, K.; Fisette, O.; Braun, T.; Lange, O.; Hummer, G.; Schäfer, L. V.: Systematic evaluation of CS‐Rosetta for membrane protein structure prediction with sparse NOE restraints. Proteins: Structure, Function, and Bioinformatics 85 (5), pp. 812 - 826 (2017)

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Journal Article

Hummer, G.; Szabo, A.: Dynamics of the Orientational Factor in Fluorescence Resonance Energy Transfer. The Journal of Physical Chemistry B 121 (15), pp. 3331 - 3339 (2017)

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Journal Article

Karathanasis, C.; Frick, F.; Hummer, G.; Heilemann, M.: Molecule Counts in Localization Microscopy with Organic Fluorophores. ChemPhysChem 18 (8), pp. 942 - 948 (2017)

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Journal Article

Mager, T.; Wood, P. G.; Bamberg, E.: Optogenetic Control of Ca²⁺ and Voltage-Dependent Large Conductance (BK) Potassium Channels. Journal of Molecular Biology (London) 429 (6), pp. 911 - 921 (2017)

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Journal Article

van Pee, K.; Neuhaus, A.; D'Imprima, E.; Mills, D. J.; Kühlbrandt, W.; Yildiz, Ö.: CryoEM structures of membrane pore and prepore complex reveal cytolytic mechanism of Pneumolysin. eLife 6, e23644 (2017)

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Journal Article

Kohlstädt, M.; Buschmann, S.; Langer, J. D.; Xie, H.; Michel, H.: Subunit CcoQ is involved in the assembly of the Cbb₃-type cytochrome c oxidases from Pseudomonas stutzeri ZoBell but not required for their activity. Biochimica et Biophysica Acta, Bioenergetics 1858 (3), pp. 231 - 238 (2017)

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Journal Article

Bhaskara, R.; Linker, S. M.; Vögele, M.; Köfinger, J.; Hummer, G.: Carbon Nanotubes Mediate Fusion of Lipid Vesicles. ACS Nano 11 (2), pp. 1273 - 1280 (2017)

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Journal Article

Simonson, T.; Hummer, G.; Roux, B.: Equivalence of M- and P-Summation in Calculations of Ionic Solvation Free Energies. The Journal of Physical Chemistry A 121 (7), pp. 1525 - 1530 (2017)

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Journal Article

Schwierz, N.; Frost, C. V.; Geissler, P. L.; Zacharias, M.: From Aβ Filament to Fibril: Molecular Mechanism of Surface-Activated Secondary Nucleation from All-Atom MD Simulations. The Journal of Physical Chemistry B 121 (4), pp. 671 - 682 (2017)

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Journal Article

Castaño-Díez, D.; Kudryashev, M.; Stahlberg, H.: Dynamo Catalogue: Geometrical tools and data management for particle picking in subtomogram averaging of cryo-electron tomograms. Journal of Structural Biology 197 (2), pp. 135 - 144 (2017)

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Journal Article

Rathmann, B.; Quirnheim Pais, D.; Thielmann, Y.: MPI tray: a versatile crystallization plate for membrane proteins. Journal of Applied Crystallography 50 (1), pp. 327 - 330 (2017)

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Journal Article

Nöll, A.; Christoph, T.; Herbring, V.; Zollmann, T.; Barth, K.; Mehdipour, A. R.; Tomasiak, T. M.; Brüchert, S.; Joseph, B.; Abele, R. et al.; Oliéric, V.; Wang, M.; Diederichs, K.; Hummer, G.; Stroud, R. M.; Pos, K. M.; Tampé, R.: Crystal structure and mechanistic basis of a functional homolog of the antigen transporter TAP. Proceedings of the National Academy of Sciences of the United States of America 114 (4), pp. E438 - E447 (2017)

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Journal Article

Konjik, V.; Brünle, S.; Demmer, U.; Vanselow, A.; Sandhoff, R.; Ermler, U.; Mack, M.: The Crystal Structure of RosB: Insights into the Reaction Mechanism of the First Member of a Family of Flavodoxin-like Enzymes. Angewandte Chemie, International Edition in English 56 (4), pp. 1146 - 1151 (2017)

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Journal Article

Weidenweber, S.; Schühle, K.; Demmer, U.; Warkentin, E.; Ermler, U.; Heider, J.: Structure of the acetophenone carboxylase core complex: prototype of a new class of ATP-dependent carboxylases/hydrolases. Scientific Reports 7, 39674 (2017)

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Journal Article

Lam, R. S.; Töpfer, F.; Wood, P. G.; Busskamp, V.; Bamberg, E.: Functional Maturation of Human Stem Cell-Derived Neurons in Long-Term Cultures. PLoS One 12 (1), e0169506 (2017)

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Journal Article

Blees, A.; Januliene, D.; Hofmann, T.; Koller, N.; Schmidt, C.; Trowitzsch, S.; Moeller, A.; Tampe, R.: Structure of the human MHC-I peptide-loading complex. Nature 551, pp. 525 - 528 (2017)

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Journal Article

Christiansen, S. H.; Murphy, R. A.; Juul-Madsen, K.; Fredborg, M.; Hvam, M. L.; Axelgaard, E.; Skovdal, S. M.; Meyer, R. L.; Sørensen, U. B. S.; Möller, A. et al.; Nyengaard, J. R.; Nørskov-Lauritsen, N.; Wang, M.; Gadjeva, M.; Howard, K. A.; Davies, J. C.; Petersen, E.; Vorup-Jensen, T.: The Immunomodulatory Drug Glatiramer Acetate is Also an Effective Antimicrobial Agent that Kills Gram-negative Bacteria. Scientific Reports 7, 15653, pp. 1 - 16 (2017)

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Journal Article

Cossio, P.; Rohr, D.; Baruffa, F.; Rampp, M.; Lindenstruth, V.; Hummer, G.: BioEM: GPU-accelerated computing of Bayesian inference of electron microscopy images. Computer Physics Communications 210 (01), pp. 163 - 171 (2017)

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Journal Article

Diskowski, M.; Mehdipour, A. R.; Wunnicke, D.; Mills, D. J.; Mikusevic, V.; Bärland, N.; Hoffmann, J.; Morgner, N.; Steinhoff, H.-J.; Hummer, G.: Helical jackknives control the gates of the double-pore K⁺ uptake system KtrABs. eLife, pp. 1 - 21 (2017)

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Journal Article

Gold, V. A. M.; Chroscicki, P.; Bragoszewski, P.; Chacinska, A.: Visualization of cytosolic ribosomes on the surface of mitochondria by electron cryo‐tomography. EMBO Reports 18, pp. 1786 - 1800 (2017)

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Journal Article

He, C.; Preiss, L.; Wang, B.; Fu, L.; Wen, H.; Zhang, X.; Cui, H.; Meier, T.; Yin, D.: Structural Simplification of Bedaquiline: the Discovery of 3-(4-(N,N-Dimethylaminomethyl)phenyl)quinoline-Derived Antitubercular Lead Compounds. ChemMedChem 12, pp. 106 - 119 (2017)

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Journal Article

Januliene, D.; Andersen, J. L.; Nielsen, J. A.; Quistgaard, E. M.; Hansen, M.; Strandbygaard, D.; Moeller, A.; Petersen, C. M.; Madsen, P.; Thirup, S. S.: Acidic Environment Induces Dimerization and Ligand Binding Site Collapse in the Vps10p Domain of Sortilin. Structure 25 (12), pp. 1809 - 1819 (2017)

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Journal Article

Januliene, D.; Manavalan, A.; Ovesen, P. L.; Pedersen, K.-M.; Thirup, S.; Nykjær, A.; Moeller, A.: Hidden Twins: SorCS Neuroreceptors Form Stable Dimers. Journal of Molecular Biology (London) 429 (19), pp. 2907 - 2917 (2017)

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Journal Article

Kohler, R.; Mooney, R. A.; Mills, D. J.; Landick, R.; Cramer, P.: Architecture of a transcribing-translating expressome. Science 356, pp. 194 - 197 (2017)

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Journal Article

López-Alonso, J. P.; Kaminishi, T.; Kikuchi, T.; Hirata, Y.; Iturrioz, I.; Dhimole, N.; Schedlbauer, A.; Hase, Y.; Goto, S.; Kurita, D. et al.; Muto, A.; Zhou, S.; Naoe, C.; Mills, D. J.; Gil-Carton, D.; Takemoto, C.; Himeno, H.; Fucini, P.; Connell, S. R.: RsgA couples the maturation state of the 30S ribosomal decoding center to activation of its GTPase pocket. Nucleic Acids Research 45 (11), pp. 6945 - 6959 (2017)

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Journal Article

Mühleip, A. W.; Dewar, C. E.; Schnaufer, A.; Kühlbrandt, W.; Davies, K. M.: In situ structure of trypanosomal ATP synthase dimer reveals a unique arrangement of catalytic subunits. Proceedings of the National Academy of Sciences of the United States of America 114 (5), pp. 992 - 997 (2017)

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Journal Article

Nürnberger, P.; Reinhardt, H. M.; Rhinow, D.; Riedel , R.; Werner, S.; Hampp, N. A.: Controlled growth of periodically aligned copper-silicide nanocrystal arrays on silicon directed by laser-induced periodic surface structures (LIPSS). Applied Surface Science 420, pp. 70 - 76 (2017)

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Journal Article

Payer, S. E.; Marshall, S. A.; Bärland, N.; Sheng, X.; Reiter, T.; Dordic, A.; Steinkellner, G.; Wuensch, C.; Kaltwasser, S.; Fisher, K. et al.; Rigby, S. E. J.; Macheroux, P.; Vonck, J.; Gruber, K.; Faber, K.; Himo, F.; Leys, D.; Pavkov-Keller, T.; Glueck, S. M.: Regioselective para-Carboxylation of Catechols with a Prenylated Flavin Dependent Decarboxylase. Angewandte Chemie, International Edition in English 56 (44), pp. 13893 - 13897 (2017)

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Journal Article

Retel, J. S.; Nieuwkoop, A. J.; Hiller, M.; Higman, V. A.; Barbet-Massin, E.; Stanek, J.; Andreas, L. B.; Franks, W. T.; van Rossum, B.-J.; Vinothkumar, K. R. et al.; Handel, L.; de Palma, G. G.; Bardiaux, B.; Pintacuda, G.; Emsley, L.; Kühlbrandt, W.; Oschkinat, H.: Structure of outer membrane protein G in lipid bilayers. Nature Communications 8, 2073, p. 1 (2017)

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Journal Article

Scherr, J.; Parey, K.; Klusch, N.; Murphy, B. J.; Balser, S.; Neuhaus, A.; Zickermann, V.; Kühlbrandt, W.; Terfort, A.; Rhinow, D.: Self-Perforated Hydrogel Nanomembranes Facilitate Structural Analysis of Proteins by Electron Cryo-Microscopy. ACS Nano 11 (6), pp. 6467 - 6473 (2017)

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Journal Article

Schulz, S.; Wilkes, M.; Mills, D. J.; Kühlbrandt, W.; Meier, T.: Molecular architecture of the N‐type ATPase rotor ring from Burkholderia pseudomallei. EMBO Reports 18 (6), pp. 1 - 10 (2017)

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Journal Article

Schumacher, D.; Bergeler, S.; Harms, A.; Vonck, J.; Huneke-Vogt, S.; Frey, E.; Søgaard-Andersen, L.: The PomXYZ Proteins Self-Organize on the Bacterial Nucleoid to Stimulate Cell Division. Developmental Cell 41, pp. 299 - 314 (2017)

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Journal Article

Vonck, J.; Mills, D. J.: Advances in high-resolution cryo-EM of oligomeric enzymes. Current Opinion in Structural Biology 46, pp. 48 - 54 (2017)

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Journal Article

Weston, C. E.; Krämer, A.; Colin, F.; Yildiz, Ö.; Baud, M. G. J.; Meyer-Almes, F.-J.; Fuchter, M. J.: Toward Photopharmacological Antimicrobial Chemotherapy Using Photoswitchable Amidohydrolase Inhibitors. ACS Infect. Dis. 3 (2), pp. 152 - 161 (2017)

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Journal Article

Wilkes, M.; Madej, G. M.; Kreuter, L.; Rhinow, D.; Heinz, V.; De Sanctis, S.; Ruppel, S.; Richter, R. M.; Joos, F.; Grieben, M. et al.; Pike, A. C. W.; Huiskonen, J. T.; Carpenter, E. P.; Kühlbrandt, W.; Witzgall, R.: Molecular insights into lipid-assisted Ca²⁺ regulation of the TRP channel Polycystin-2. Nature Structural and Molecular Biology 24 (2), pp. 123 - 130 (2017)

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Book Chapter (3)

2017

Book Chapter

Scheller, S.; Ermler, U.; Shima, S.: Catabolic Pathways and Enzymes Involved in Anaerobic Methane Oxidation. In: Handbook of Hydrocarbon and Lipid Microbiology, pp. 1 - 29. Springer International Publishing AG 2017, 6330 Cham Switzerland (2017)

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Book Chapter

Bazzone, A.; Barthmes, M.; Fendler, K.: Chapter Two - SSM-Based Electrophysiology for Transporter Research. In: Methods in Enzymology, Vol. 594, pp. 31 - 83 (Ed. Ziegler, C.). Academic Press, Cambridge, MA 02139, USA (2017)

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Book Chapter

Gold, V. A. M.; Brandt, T.; Cavellini, L.; Cohen, M. M.; Ieva, R.; van der Laan, M.: Analysis of Mitochondrial Membrane Protein Complexes by Electron Cryo-tomography. In: Mitochondria. Methods in Molecular Biology (MIMB), Vol. 1567, pp. 315 - 336. Humana Press, New York (2017)

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Conference Paper (1)

2017

Conference Paper

Krüger, C.; Fricke, F.; Karathanasis, C.; Dietz, M. S.; Malkusch, S.; Hummer, G.; Heilemann, M.: Molecular counting of membrane receptor subunits with single-molecule localization microscopy. In: Proceedings SPIE 10071, Single Molecule Spectroscopy and Superresolution Imaging X, Vol. 10071, 100710K. SPIE BiOS, 2017, San Francisco, California, United States, January 28, 2017 - February 02, 2017. (2017)

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Thesis - PhD (9)

2017

Thesis - PhD

Reichel, K.: Computational Modeling of Membrane Proteins with Sparse Experimental Data. Dissertation, 179 pp., Fachbereich Biochemie, Chemie, Pharmazie, Johann Wolfgang Goethe-Universität Frankfurt, Frankfurt am Main (2017)

MPG.PuRe

Thesis - PhD

Brünle, S.: Mechanistische Einblicke in die Funktionsweise eines Molybdänspeicherproteins. Dissertation, 163 pp., Fachbereich Biochemie, Chemie, Pharmazie, Johann Wolfgang Goethe-Universität Frankfurt, Frankfurt am Main (2017)

MPG.PuRe

Thesis - PhD

Stamm, M.: Comparison of Membrane Proteins Using Computational Programs. Dissertation, 186 pp., Goethe Universität - Fachbereich Biochemie, Chemie und Pharmazie, Frankfurt am Main (2017)

MPG.PuRe

Thesis - PhD

Safarian, S.: Structural insights into cytochrome bd-type oxygen reductases. Dissertation, 176 pp., Fachbereich Biochemie, Chemie, Pharmazie, Johann Wolfgang Goethe-Universität Frankfurt, Frankfurt am Main (2017)

MPG.PuRe

Thesis - PhD

Demmer, J. K.: Structure and mechanism of several flavin-based electron bifurcating enzymes. Dissertation, 132 pp., Fachbereich Biowissenschaften, Johann Wolfgang Goethe-Universität Frankfurt, Frankfurt am Main (2017)

MPG.PuRe

Thesis - PhD

Bazzone, A.: Mechanismen des Zucker-Transports: Vergleichende elektrophysiologische Untersuchungen an Transportern der major facilitator superfamily. Dissertation, 261 pp., Johann Wolfgang Goethe-Universität , Fachbereich Biochemie, Chemie, Pharmazie, Frankfurt am Main (2017)

MPG.PuRe

Thesis - PhD

Weidenweber, S.: Röntgenstrukturanalyse von Schlüsselenzymen im anaeroben Abbau von Kohlenwasserstoffen. Dissertation, 173 pp., Fachbereich Biochemie, Chemie, Pharmazie, Johann Wolfgang Goethe-Universität Frankfurt, Frankfurt am Main (2017)

MPG.PuRe

Thesis - PhD

Mühleip, A.: Tomographic studies of mitochondrial membrane-shaping proteins. Dissertation, 216 pp., Goethe-Universtität, Frankfurt am Main (2017)

MPG.PuRe

Thesis - PhD

Wöhlert, D.: Structures and mechanism of secondary active transporters. Dissertation, 194 pp., Fachbereich Biochemie, Chemie und Pharmazie, Goethe-Universität, Frankfurt am Main (2017)

MPG.PuRe

Thesis - Master (13)

2017

Thesis - Master

Schulz, L.: Lead discovery from the mycobacterial ATP synthase Fo rotor ring and characterisation of its binding site. Master, 75 pp., Goethe-Universität, Frankfurt am Main (2017)

MPG.PuRe

Thesis - Master

Wießing, S. A.: Biophysical characterization of the voltage-gated sodium channel NaChBac. Master, 50 pp., Goethe-Universität, Fachbereich Physik, Frankfurt am Main (2017)

MPG.PuRe

Thesis - Master

Diwo, C.: Mapping the Cytoskeletal Components of the Mammalian Erythrocyte through Electron Microscopy - Biomimetic Implementation in Body Armour. Master, 94 pp., Fachhochschule Kärnten, Villach (2017)

MPG.PuRe

Thesis - Master

Grotz, K.: Conformational Dynamics of Single-Stranded Nucleic Acids - A Comparison of Molecular Dynamics Simulations to Single-Molecule FRET Experiments. Master, 102 pp., Goethe-Universität, Fachbereich Physik, Frankfurt am Main (2017)

MPG.PuRe

Thesis - Master

Salustros, N.: Single-particle cryo-EM studies on fatty acid synthase from Saccharomyces cerevisiae. Master, 93 pp., Johann Wolfgang Goethe-Universität, Frankfurt (2017)

MPG.PuRe

Thesis - Master

Bärland, N.: Electron Microscopic Investigation of Protein Complexes. Master, 74 pp., Institute of Biochemistry, Goethe-Universität, Frankfurt am Main (2017)

MPG.PuRe

Thesis - Master

Linker, S. M.: Predicting Drug-Fragment Binding Sites with Molecular Dynamics Simulations and Markov State Models. Master, 97 pp., Goethe-Universität Frankfurt, Frankfurt am Main (2017)

MPG.PuRe

Thesis - Master

Gecht, M.: Biophysical analysis of a membrane sensing amphipathic helix in vitro and in silico. Master, 89 pp., Fachbereich Biochemie, Chemie, Pharmazie, Johann Wolfgang Goethe-Universität Frankfurt, Frankfurt am Main (2017)

MPG.PuRe